BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D11SP1|AL427013
(735 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 931 0.0
>3x_Contig1553
Length = 8593
Score = 931 bits (449), Expect = 0.0
Identities = 635/728 (87%)
Strand = Plus / Plus
Query: 8 gaaaaatgtaatcatcggagaatgcagaagagtatatagacagtggaaaaadtgatgtgg 67
|||| ||||||||||||| ||||||||| ||||||||||||||| |||||| | || |
Sbjct: 7645 gaaatatgtaatcatcggtgaatgcagatgagtatatagacagttgaaaaatttattttt 7704
Query: 68 agcaagggaaagtkctctcctttacdacacaccatacwakckgcckaagtaaaactgtag 127
|||||| |||||| ||||||||||| ||||||||||| | | ||| ||||||||||||||
Sbjct: 7705 agcaagtgaaagttctctcctttactacacaccatactatctgcctaagtaaaactgtag 7764
Query: 128 ccaaaggaaacaagtcgagatatcatkctaaakcakcgctgtttcgacctccctcactcc 187
|||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 7765 ccaaaggaaacaagtcgagatatcattctaaatcatcgctgtttcgacctccctcactcc 7824
Query: 188 tcactttctttcacttcaaaakctcagtgcattattgacaaaaacgcgcgtgccagckat 247
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 7825 tcactttctttcacttcaaaatctcagtgcattattgacaaaaacgcgcgtgccagctat 7884
Query: 248 kaaakcgckgtaatkackacdatkgtratraatakkgagckgtctctcttctttkkgkkg 307
||| ||| ||||| || || || || || |||| || | |||||||||||||
Sbjct: 7885 taaatcgctgtaattactactattgttattaatattgatctgtctctcttcttttttttt 7944
Query: 308 kcattttccgtacgtwattagtkgattcaatccgctagatttcccaacacaacaagggtt 367
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7945 tcattttccgtacgttattagttgattcaatccgctagatttcccaacacaacaagggtt 8004
Query: 368 tacatatgckakrakcggtktacgtggacgttactaaadggggggagcgacatgcaagac 427
||||||| | | | |||| ||||| |||||||||||| ||||| | |||| ||||||
Sbjct: 8005 tacatattctattatcggtttacgttgacgttactaaatttggggatctacattcaagac 8064
Query: 428 agaatagtgaagcgtackgaatkagcagggtgaggaataakkgagttagagggtatcgtt 487
||||||||||||||||| |||| |||||||| |||||||| |||||| |||||||||||
Sbjct: 8065 agaatagtgaagcgtactgaattagcagggttaggaataattgagttatagggtatcgtt 8124
Query: 488 ttcgattctgaaattctngcgttgtttatvtvcccatcgccacaagtgnncanaagaccn 547
||||||||||| ||||| |||||||||| | ||||||||||||||| || ||||||
Sbjct: 8125 ttcgattctgatattctttcgttgtttattttcccatcgccacaagttttcataagacct 8184
Query: 548 cnnncnnnragcatacgaggggtagacgtaaaavraaragcgagccgataacgcacgaga 607
| | ||||||||| |||||||||||||| || | ||||||||||||||||||||
Sbjct: 8185 ctttcttttagcatacgatgggtagacgtaaaattaatatcgagccgataacgcacgaga 8244
Query: 608 ggaanaggaccgngactgtcatcaaacgtaaggccggtgtgtkcaagaaagcgcacgagt 667
|||| ||||||| |||| |||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 8245 ggaataggaccgtgactttcatcaaacgtaaggccggtttgttcaagaaagctcacgagt 8304
Query: 668 gagcggtgtgatgtcaagttgatgttgccgtgataattcttggccacaacaacacgtttk 727
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8305 tagcggtgttatgtcaagttgatgttgccgtgataattcttggccacaacaacacgtttt 8364
Query: 728 acgagttt 735
||||||||
Sbjct: 8365 acgagttt 8372
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2153
Number of Sequences: 1807
Number of extensions: 2153
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 735
length of database: 10,358,551
effective HSP length: 16
effective length of query: 719
effective length of database: 10,329,639
effective search space: 7427010441
effective search space used: 7427010441
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (100.1 bits)